CDS

Accession Number TCMCG057C44003
gbkey CDS
Protein Id XP_018447940.1
Location join(6018749..6018776,6018983..6019148,6019248..6019338,6019409..6019467,6019540..6019600,6019711..6019801,6019913..6019989,6020083..6020199)
Gene LOC108819407
GeneID 108819407
Organism Raphanus sativus

Protein

Length 229aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018592438.1
Definition PREDICTED: mRNA turnover protein 4 homolog [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category A
Description Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14815        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000027        [VIEW IN EMBL-EBI]
GO:0000956        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006401        [VIEW IN EMBL-EBI]
GO:0006402        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0022618        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042255        [VIEW IN EMBL-EBI]
GO:0042273        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070925        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071826        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCTAAATCAAAGAGAGACAGACCAGTTACTTTGTCAAAGACAAAGAAGAAAGGAAGAGCGCACAAGGAGGTTATTGTAAATGGAATCAGAGAGGCTGTCGAGAAGTATTCATCCGTCTATGTTTTCTCTTTTGAGAACATGAGAAACATCAAGTTCAAGGAGTTCAGACAGCAGTTTAGGCAGAACGGAAAGTTCTTCCTCGGTTCGAACAAGGTGATGCAGGTTGCTCTAGGTCGTTCTGCTTCTGATGAAATGAGTCCTGGTATCTTCAAAGCCTCCAAGATGCTTCATGGTGATGCTGGACTTCTTGTTACGGATATGCCAAAGGAAGAGGTCGAAAGCTTATTTAACGCTTATGAAGATTCAGACTTTTCAAGAACCGGAAGCACTGCTGTAGAAACGGTTGAGCTGAAGGAAGGACCTCTAGAACAGTTCACACATGAGATGGAACCCTTTCTTAGGAAGCAGGGTATGCCTGTTCGTCTTAACAAAGGTACGGTGGAGTTACTCTCCGACTTTGTAGTTTGTGAAGAAGGGAAACCTCTTTCGCCAGAATCTTCTCGCATTTTGCGTCTGTTGGGAATCAAGTTGGCTACTTTCAAACTCAACTTAGTCTGCAGATGGAGCCCTAGTGACTTTGAGCTTTACAGAGAAGGCTTGGATCTCTCTGACGTTGAAACCTCTTGA
Protein:  
MPKSKRDRPVTLSKTKKKGRAHKEVIVNGIREAVEKYSSVYVFSFENMRNIKFKEFRQQFRQNGKFFLGSNKVMQVALGRSASDEMSPGIFKASKMLHGDAGLLVTDMPKEEVESLFNAYEDSDFSRTGSTAVETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGTVELLSDFVVCEEGKPLSPESSRILRLLGIKLATFKLNLVCRWSPSDFELYREGLDLSDVETS